Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVVILFVHKVIHVLPIICKKRKIEKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFIDQEADGLDILVEK
4UPU Chain:B ((8-26))-----------------------------------------------------------------------------------------NHWQKIRTMVNL-PVISPFK---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 13 -2449 -188.35 -128.87
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain B : 0.41

3D Compatibility (PKB) : -188.35
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.41
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_4UPU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UPU-query.scw
PDB file : Tito_Scwrl_4UPU.pdb: