Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGV-KNHLLDMSLLNQLAPNALTRN---DIEIEVKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPACHLRSKGYEEYMVMKGERA
2PG3 Chain:A ((2-221))--MKRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPVPD---------NTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAACHLRANGLAQYQKDAATV-


General information:
TITO was launched using:
RESULT:

Template: 2PG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1006 -109159 -108.51 -527.34
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -108.51
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2PG3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PG3-query.scw
PDB file : Tito_Scwrl_2PG3.pdb: