Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHLTTMSELSTEEIKDLLQTAQE----LKSGKTDNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNL-DGTSTSVQKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVN-IPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHGDIKHSRVARSNAEVLTRL-GARVLFSGPSEWQDEENT----------FGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQRALQTNVKRGEAAYVISH
2RGW Chain:F ((1-303))MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYA-DIIVLRHP-SEGAARLASEYSQVPIINAG----QHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKK--FIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDN------------


General information:
TITO was launched using:
RESULT:

Template: 2RGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1439 -173851 -120.81 -616.49
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain F : 0.78

3D Compatibility (PKB) : -120.81
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_2RGW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RGW-query.scw
PDB file : Tito_Scwrl_2RGW.pdb: