Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNNRNVLLCVSGGIAVYKACALTSKLVQAGANVKVIMTESACRFVSPLTFQALSRHEVYTD--T---FKEQNPSVISHIDAADWADLIIVAPATANVIGKLANGIADDMLTTTLLAA--TAPVWIAPAMNVHMYDHPAVKRNISVLYQDGYCFIEPSEGYLACGYVGKGRLEEPENIVKLAEKHFAEETSAPLEGKHVVITAGPTREAIDPVRFFTNKSTGKMGYALAEAAVQLGARVILISGPVSLDQPKGLAEFIPVQSAADMREAVLSVYDASDIVIKTAAVADFTPKTVFDHKMKKQDGGMTLELKRTVDILKELGEKKKEQILVGFAAETQDIEHYARKKLAAKNLDLIVANDVKANGAGFGADTNIVTIFFKDGHKRELPIMSKLDVSFEILQEIAALSKQTGERS
1MVL Chain:A ((19-197))---KPRVLLAASGSVAAIKFGNLCHCFT-EWAEVRAVVTKSSLHFLDKLSLPQE--VTLYTDEDEWSSWNKI-GDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIK---------NGAMAEPSLIYSTVRLFW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 895 -159593 -178.32 -979.10
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -178.32
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_1MVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MVL-query.scw
PDB file : Tito_Scwrl_1MVL.pdb: