Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTPVIDLILLAATGVDLYRGASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHG-AKGWLRHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVIIGIDFLITASYFIWPKKEKASANLRS
4MK7 Chain:B ((376-415))---------------------------------------------------------------------------------------ASGKRVYYLTRDPTTPLARAAWETARHTPVNSWLGNIIMY-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 54 2409 44.60 61.76
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.45

3D Compatibility (PKB) : 44.60
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.45
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_4MK7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MK7-query.scw
PDB file : Tito_Scwrl_4MK7.pdb: