Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSNILKDKVDIVDL----RKNIGMVFQKGNPFPQ-SIFDNVAYGPRVHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTSALS-LSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIEELILEL--KDKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNPKDQRTLDYISGKFG
1L2T Chain:A ((19-223))--------------------------YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPT-----EGEVYID--NIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL-PLIFKYRGAMSGEERRKRALECLKMA-ELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEV---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 960 -7432 -7.74 -37.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -7.74
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_1L2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L2T-query.scw
PDB file : Tito_Scwrl_1L2T.pdb: