Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDIKAMGYVVIPRLPFKEFRDEKIYDHLFKRAEYRPNQELELGQTIIKVVELAKDFNWSAAQIKYSLDRMEKQGYIKLHRLPQKRGLIVTILHYADYIQLGNYMKNKALEPAQIEHQEVDDKMKNAFELYENKVARSVGPMEAQRIGYMVDDYGEEKVMEAIKTAFQLKGKAASLSYVQAILSNPFTQKRKEKQYGYKQSSQYRHRISNDHAGTSGKVSPLFGNKTGRIRRKG
2JT1 Chain:A ((1-71))---------------MSESIVTKIISIVQERQNMDDGAP-------VKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVNAGKGVPGLWRLLE--------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 245 -39105 -159.61 -550.77
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -159.61
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_2JT1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JT1-query.scw
PDB file : Tito_Scwrl_2JT1.pdb: