Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKQLIQSEEEFKRIAE--QEGVFVFLKHSTTCPISQAAFHEFDAFANQHEDVPAYYLQVQEARPLSNFIAETYGVKHESPQIFIIQNGEVKWHTSHSQITEAAIEQHLS
4AJ8 Chain:A ((2-101))--VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECED----IAQDNQIAC--PTFLFMKNGQKLDSLS-G-ANYDKLLELV-


General information:
TITO was launched using:
RESULT:

Template: 4AJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 403 -7454 -18.50 -76.84
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -18.50
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.683

(partial model without unconserved sides chains):
PDB file : Tito_4AJ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AJ8-query.scw
PDB file : Tito_Scwrl_4AJ8.pdb: