Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKESISNAPHLLDAEVGHALR-RAVLSDEISEEQARAALDALPYLIDNRYPHSPRLIEYTWQLRHNVTFYDAL-YVALATALDVPLLTGD---SRLAAAPGLPCEIKLVR---------
3I8O Chain:A ((3-142))
AKKVCVDTCVVID----GRITELIERGKLKDATIIIPEAVVSELEYQANMGREIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGE---IDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVELVLD
General information:
TITO was launched using:
RESULT:
Template:
3I8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50126 for 973 contacts (-51.5/contact) +
2D Compatibility (PS) -13930 + (NN) -2821 + (LL) 568
1D Compatibility (HY) 1200 + (ID) 1250
Total energy: -66359.0 ( -68.20 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_3I8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I8O-query.scw
PDB file :
Tito_Scwrl_3I8O.pdb
: