Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAIPPEVHSGLLSAGCGPGSLLVA-AQQWQELSDQYALACAELGQLLGEVQASSWQGTAATQYVAAHGPYLAWLEQTAINSAVTAAQHVAAAAAYCSALAAMPTPAELAANHAIHGVLIATNFFGINTVPIAL-NEADYVRMWLQAADTMAAYQAVADAATVAVPSTQPAPPIRAPGGDAADTRLDVLSSIGQLIRDILDFIANPYKYFLEFFEQFGFSPAVTVVLALVALQLYDFLWYPYYASYGLLLLPFFTPTLSALTALSALIHLLNLPPAGLLPIAAALGPGDQWGANLAVAVTPATAAVPGGSPPTSNPAPAAPSSNSVGSASAAPGISYAVPGLAPPGVSSGPKAGTKSPDTAADTLATAGAARPGLARAHRRKRSESGVGIRGYRDEFLDATATVDAATDVPAPANAAGSQGAGTLGFAGTAPTTSGAAAGMVQLSSHSTSTTVPLLPTTWTTDAEQ |
| 4QTS Chain:A ((1-369)) | MKMVVLKPKINSKFHFKIFHSNSLFSAIVNNYIKLYGREDLE--KNIEKIKNIRLSSLLYKIKNIYLIPK-----------------------------------PEHPEFYPKD-----IKKIQFFSIKAYKELLDNELD----WKNKIKHIVDYQTINKS---IVISEKEIEEIKRIFGIKAEKLKH--AKISLISKHLEQKVAD--KGQLYNIEFIKLNENVEFYFLID----------------------YNNEDKEFIKKLEASIKL--IEDEGL------------------------------------------------------------------GGAGFFEKVEIVDLPEDFNEILDENS-----KYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGSIVKNDFIGDVKDVYTHGKPILLPFNP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78827 for 2319 contacts (-34.0/contact) +
2D Compatibility (PS) -32572 + (NN) -9906 + (LL) 9688
1D Compatibility (HY) -13600 + (ID) 2500
Total energy: -127717.0 ( -55.07 by residue)
QMean score : 0.133
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