Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQ-FNGAEVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRP--HAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGPRKVG-DALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPE-VD----------------------------PALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV |
| 1DB3 Chain:A ((2-355)) | KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR---------PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL-VQ-EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIA-QGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-EQPEDFVIATGVQYSVRQFVEMAA-AQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAE-ETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178730 for 2532 contacts (-70.6/contact) +
2D Compatibility (PS) -31781 + (NN) -12350 + (LL) 1076
1D Compatibility (HY) -11600 + (ID) 3900
Total energy: -237285.0 ( -93.71 by residue)
QMean score : 0.499
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