Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNPRASVLVDSYADD---------WTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQ-S--------VPLNGPVIAIAVQRWASWHA
2FUR Chain:A ((20-164))
YSDEDLVAMLDRNFTCTVSFID-GGIPYAIPMMLASEGK---------TIYLHGS------MKSRIYGILKTGQLIAISLLEINGIVLAKEIKNNSINYVSALIFGRPYEIDDTEKKIEVFRLLTEKLVKGRWDNSIKPSYEDLNGVFVFAVKPETFSMKA-
General information:
TITO was launched using:
RESULT:
Template:
2FUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59570 for 856 contacts (-69.6/contact) +
2D Compatibility (PS) -13951 + (NN) -3428 + (LL) 780
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -78269.0 ( -91.44 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2FUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FUR-query.scw
PDB file :
Tito_Scwrl_2FUR.pdb
: