Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
4FR9 Chain:A ((34-92))
--------------------------------------PSQAIQDAL--LYPNATAI-WEQ---G--VYYVADCQA-DGRE-EVWFDANANWLMTETEL----
General information:
TITO was launched using:
RESULT:
Template:
4FR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5330 for 292 contacts (-18.3/contact) +
2D Compatibility (PS) -5402 + (NN) -3109 + (LL) 2032
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -14409.0 ( -49.35 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4FR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FR9-query.scw
PDB file :
Tito_Scwrl_4FR9.pdb
: