Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
3S2W Chain:A ((23-157))
------FIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYREDGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDE---RSYRVFLTEKGKKLEPDMKKIASEWGEILFSSFDDRQRREITNSLEIMFENGLK--
General information:
TITO was launched using:
RESULT:
Template:
3S2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44725 for 838 contacts (-53.4/contact) +
2D Compatibility (PS) -14807 + (NN) -9597 + (LL) 136
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -75293.0 ( -89.85 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3S2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S2W-query.scw
PDB file :
Tito_Scwrl_3S2W.pdb
: