Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------FGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
2PNF Chain:B ((11-247))------------------LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM----


General information:
TITO was launched using:
RESULT:

Template: 2PNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121567 for 1874 contacts (-64.9/contact) +
2D Compatibility (PS) -24307 + (NN) -4643 + (LL) 980
1D Compatibility (HY) -21200 + (ID) 5050
Total energy: -175787.0 ( -93.80 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_2PNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PNF-query.scw
PDB file : Tito_Scwrl_2PNF.pdb: