Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYPLGEALLALYRWRGPLINAGVGGHGYTYLLGAEANRFVFANADAFSWSQT---FESLVPVD-GPTALIVSDGADHRRRRSVVAPG-LRHHHVQRYVATMVSNIDTVIDGWQP--------GQRLDIYQELRSAVRRSTAESLFGQRLAVHSD-------FLGEQLQPLLDLTRRPPQVMR-LQQRVNSPGWRRAMAARKRIDDLIDAQIADARTAP-----RPDDHMLTTLISGCSEEGTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGGR-VPAADDLSALTYLNGVVHETLRLYSPGVISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQRTHRIRAANFAALRPWPGLTVEIRKSAPAQ |
| 4DVQ Chain:A ((39-476)) | -----HLEMHQTFQELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMILEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLL-----KAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDI---------FHHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHFLVETL--TQEDIKMVYSFILRPGTSPLLTFRAI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216313 for 3325 contacts (-65.1/contact) +
2D Compatibility (PS) -43066 + (NN) -11057 + (LL) 1364
1D Compatibility (HY) -22800 + (ID) 3900
Total energy: -295772.0 ( -88.95 by residue)
QMean score : 0.447
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