Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLATIDKFAYEKSMLINVGDEKGTLLDAAVRRADPALALELGTYLGYGALRIAR-AAPEARVYSVELAEANASNARRIWAHAGVDDRVVCVVGTIGDGGRTLDALTEHGFATGTLDFVFLDHDKKAYLPDLQSILDRGWLHPGSIVVADNVRVPGAPKYRAYMRRQQGMSWNTIEHKTHLEYQTLVPDLVLESEYLG
3A7D Chain:A ((27-206))
VLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD----LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSS--SFECTHYSSYLEYMKVV-----------
General information:
TITO was launched using:
RESULT:
Template:
3A7D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86866 for 1408 contacts (-61.7/contact) +
2D Compatibility (PS) -19477 + (NN) -6043 + (LL) 448
1D Compatibility (HY) -17600 + (ID) 3500
Total energy: -133038.0 ( -94.49 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3A7D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A7D-query.scw
PDB file :
Tito_Scwrl_3A7D.pdb
: