Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATLTKTLGSLDDFRGTLCVPG--DPDYPRV--RAIWNGQV----AREPALIATCHDACDVRTVLRRAVDAGMVTAVRGGGHNVAGTALCD----GGVVIDLSAMRAVSLDPATGRVRVQGGATLADLDHATVPF--ARVAPAGIVTTTGVGGLTLGGGVGWTTRRFGLSCDNLVAVRLVTAAGDYLSVDDERDPELMWGLRGGG-GNFGIVTEFEFATHPFGPVAVAGFVVYRL-DDGPAVLRGYRQFAAAAPEEVTTIVVLRHAPPAPWIPVDQRGKPVVMIGAVHTGSIQTGIEALRP-VKSLARPVADTVWPTPFLAHQAVLDA---S-NPA---------GHRYYWKSDHLA-ELNDEAIDLLVEQTAQLSSPDSLIGIFQLGGAAARG-GERSCFPSRHA-RFMVNYATHWTEARE-DDLHRQWTRDAIEALAPYG---LGTAYVNFTADDAP---------MHVETLYSTTEFSRLVTLKNRLDPDNVFRNNHNIRPSA |
| 4UD8 Chain:A ((52-531)) | -------------------FSPDQNATLFKEELESTAQNLRYLTPSNPKPVFIFEPLYETHVQAAVVCAKKLQLHLRLRSGGHDYEGLSFVAEDETPFVIVDLSKLRQVDVDLDSNSAWAHAGATIGEVYYRIQEKSQTHGFPAGLCSSLGIGGHLVGGAYGSMMRKFGLGADNVLDARIVDANGQILDRAA-MGEDVFWAIRGGGGGSFGVILAWKIKLVPVPATVTVFTVTKTLEQDGTKVLYKWEQIADKLDDDLFIRVIISPASK-------GNRTISMSYQAQFLGDSNRLLQVMQKSFPELGLT-KKDCTEMSWIKSVMYIAGFPNSAAPEALLAGKSLFKNHFKAKSDFVKEPIPVEGLEGLWERFLEE--DSPLTIWNPYGGMMSRISESEIPFPHRNGTLFKIQWLSTWQDGKVSEERHMKWIREMYSYMEQYVSKNPRQAYVNYRDLDLGTNEGETDAREWGAKYYK-GNFERLVKIKGEFDPDNFFRHEQSVPTKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240728 for 3736 contacts (-64.4/contact) +
2D Compatibility (PS) -46703 + (NN) -18409 + (LL) 1720
1D Compatibility (HY) -21600 + (ID) 5050
Total energy: -330770.0 ( -88.54 by residue)
QMean score : 0.557
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