Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQ-LGVPPA--PILKGDKGEPCWPD--GMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPR-TMPAALHWDRILFCAKEATYKAW-----FPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL-- |
| 1QR0 Chain:A ((1-228)) | MKIYGIYMDRPLSQEENERFMTFI--------SPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLDKSDIRFSTQEYGKPCIPDLPDAHFNISHSGRWVIGAFDSQ----PIGIDIEKTKPISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSIELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELLRAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50067 for 1531 contacts (-32.7/contact) +
2D Compatibility (PS) -23104 + (NN) -10016 + (LL) 124
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -84913.0 ( -55.46 by residue)
QMean score : 0.085
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