Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTF-PFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADL-GYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
5EUG Chain:A ((25-220))
-----------------------------QTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAI-PPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPQPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDW---
General information:
TITO was launched using:
RESULT:
Template:
5EUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93659 for 1566 contacts (-59.8/contact) +
2D Compatibility (PS) -21409 + (NN) -14292 + (LL) 2832
1D Compatibility (HY) -17200 + (ID) 4000
Total energy: -147728.0 ( -94.33 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_5EUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EUG-query.scw
PDB file :
Tito_Scwrl_5EUG.pdb
: