Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDMWDVRITDTSLRDGSHHKRHQFTKDEVGAIVAALDAAGVPVIEVTHGDGLGGSSFNYGFSKTPEQELIKLAAATA------KEARIAFLMLPGVGTKDDIKEARDNGGSICRIATHCTEAD--------------VSIQHFGLARELGLETVGFLMMA------HTIAPEKLAAQARIMADAGCQCVYVVDSAGALVLDGVADRVSALVAELGEDAQVGFHGHENLGLGVANSVAAVRAGAKQIDGSCRRFGA------GAGNAPVEALIGVFDKIGVKTGIDFFDIADAAEDVVRPAMPAECLLDRNALIMGYSGVYSSFLKHAVRQAERYGVPASALLHRAGQRKLIGGQEDQLIDIALEIKRELDSGAAVTH |
| 1YDO Chain:A ((1-284)) | MPYPKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVH------------PKWIPALRDAIDVAKGIDREKGVTYAALV----PNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARF-PANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKM----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132303 for 2166 contacts (-61.1/contact) +
2D Compatibility (PS) -27354 + (NN) -12044 + (LL) 5636
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -176365.0 ( -81.42 by residue)
QMean score : 0.555
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