Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGAPTERLVDTNGVRLRVVEAGEPGAPVVILAHGFPELAYSWRHQIPALADAGYHVLAPDQRGYGGSSRPEAIEAYDIHRLTADLVGLLDDVGAERAVWVGHDWGAVVVWNAPLLHADRVAAVAALSVPALP-RAQVPPTQAFRSRFGENFFYILYFQEPGIADAELNGDPARTMRRMIGGLRPPGDQSAAMRMLAPGPDGFIDRLPEPAGLPAWISQEELDHYIGEFTRTGFTGGLNWYRNFDRNWETTADLAGKTISVPSLFIAGTADPVLTFTRTDRAAEVISGPYREVLIDGAGHWLQQERPGEVTAALLEFLTGLELR
5AM2 Chain:A ((249-543))-------------VRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA--NPVFDYQLYFQEPGVAEAELEQNLSRTFKSL---FRASDESVL----VCEAGGLFVNS-PEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRG-HIEDCGHWTQMDKPTEVNQILIKWL------


General information:
TITO was launched using:
RESULT:

Template: 5AM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165853 for 2494 contacts (-66.5/contact) +
2D Compatibility (PS) -30429 + (NN) -12048 + (LL) 1908
1D Compatibility (HY) -29200 + (ID) 5950
Total energy: -241572.0 ( -96.86 by residue)
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_5AM2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AM2-query.scw
PDB file : Tito_Scwrl_5AM2.pdb: