Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTDANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGEGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA
4NXI Chain:A ((8-207))
-QKSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMSLAILNENR------------------------------REGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHE-----LDEVITQSLADAGLPAELAKAAT---SDAYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD-
General information:
TITO was launched using:
RESULT:
Template:
4NXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93017 for 1518 contacts (-61.3/contact) +
2D Compatibility (PS) -20678 + (NN) -6083 + (LL) 2256
1D Compatibility (HY) -4000 + (ID) 1500
Total energy: -123022.0 ( -81.04 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_4NXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NXI-query.scw
PDB file :
Tito_Scwrl_4NXI.pdb
: