Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLA-RVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLA--DRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVE---GPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
1Q77 Chain:A ((1-138))
-----------SNAMKVLLVLTDAYS-----DCEKAITYAVNFSEKLGAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREVWEKLT----GSTEIPGVEYRIGPLSEEVKKFVEGKGYELVVWA-CYPSAYL--CKVIDGLNLASLIVK--
General information:
TITO was launched using:
RESULT:
Template:
1Q77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72158 for 923 contacts (-78.2/contact) +
2D Compatibility (PS) -14276 + (NN) -4467 + (LL) 2280
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -97471.0 ( -105.60 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1Q77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q77-query.scw
PDB file :
Tito_Scwrl_1Q77.pdb
: