Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPNFLVIVADDLGFSDIGAFGG-EIATPNLDALAIAGLRLTDFHT-ASTCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGR-YDAGPEALRQERLARLKELGLVEADVEAHPVLA-----LTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDL-LGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFA--TVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEA-AHDENTVTG-----WELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQ--PGKLAELIEHWKRYVSETGVVEGASPFLVR |
| 3B5Q Chain:A ((15-448)) | --EKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGMMPHQTNVRSNSSEP---------VNTRLPENVPTLGSLFSESGYEAVHFGKTHDMG------SLRGFKHKEPVAKP----FTD-PEFP-----------------------VNNDSFLDVGTCEDAVAYLSNP-PKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDN-F--------DVEDWSNIPTPVQYICCSHRRMTQAAHWNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDG---------MASHRMVT------------------------------------KHISFYDEMTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDLAGIAVP---------AEKAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGRMVRGPRYKYTHYLE---GNGEELYDMKKDPGERKNLAKDPKYSKILAEHRALLDDYITRSKDDYRSLKVDAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161539 for 3699 contacts (-43.7/contact) +
2D Compatibility (PS) -43832 + (NN) -14179 + (LL) 5592
1D Compatibility (HY) -9600 + (ID) 4600
Total energy: -228158.0 ( -61.68 by residue)
QMean score : 0.592
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