Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVLKMTDLDLKGKRVLIREDLNVPVKDGQVQSDARIKAALPTLKLALEKGAA-VMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDGVEVKA-------GDLVLFENVRFN--------------KGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAA-AGHKVGKSLYE-------ADLVETAKAIAAKVKVPLPVDVVVAKEFAESA-VATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIADSAAFS---IAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILEQRAKG |
| 3PGK Chain:A ((9-415)) | ---LSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPN-GERNEKYSLAPVAKELQSLLGKDVTFLNDCV-GPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQR--AAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAVGPEIAKLMEKAKAKG--VEVVLPVDFIIADAFSASANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKATVILWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSEKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10882 for 3076 contacts (3.5/contact) +
2D Compatibility (PS) -38308 + (NN) 9960 + (LL) 1244
1D Compatibility (HY) 20400 + (ID) 1650
Total energy: 2528.0 ( 0.82 by residue)
QMean score : 0.115
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