Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYSRIALFGGFAAAALLAGCSASSGKPGGKDWTRWTCDSKAVIEWRYIDGSKNIVDLRLKDEDDVVHHLEQEPAAVGAFYSDGRLGFHLENDEGLVYWVETDDLIGRGCKAR
2F09 Chain:A ((1-77))
----------------------------MQTDTLEYQCDEK-PLTVKLNNP-RQEVSFVY---DNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKR--DRIVLNNCQLQ
General information:
TITO was launched using:
RESULT:
Template:
2F09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32387 for 538 contacts (-60.2/contact) +
2D Compatibility (PS) -8130 + (NN) -460 + (LL) 1868
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -43009.0 ( -79.94 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_2F09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F09-query.scw
PDB file :
Tito_Scwrl_2F09.pdb
: