Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MFDTRLIRLPDQSHTHAHEHHQLVMSLAGRAEFEVNGCGGEVCRMRACLVPGEAGHVFAGVGDN-----RMLIIDLGEDNPTPEDPDLLARLFEAPRYPTLDADFQNLLSYA-GAELARYGSDPLLTRALGGVLIRALH----------------------LRLFGEQQPLAASGPLDLERLDAHIVRNLARRITVAELAQVACL------------SPSHFHAQFKDSVGLTPHQYLLKVRLDCAARLLRESRLPLVRIAEECGFSSQSALTTAMRRYLGLTPKSLRKG-------- |
| 3VRH Chain:A ((1-309)) | MKCKFCSREAYIKIHYPKMYLCEEHFKEYFERKVSRTIERYKLLTKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGEVKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWNTEYLAKGGPILPQQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEECPYTTLDMKGVLNELEEKRPG-----TKFNFVRGYLKKKKLFEPKECKICRMPSSGDICAFCKFWGLKKEINFKVSSTDEEPFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84939 for 1674 contacts (-50.7/contact) +
2D Compatibility (PS) -25729 + (NN) -5507 + (LL) 628
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -121097.0 ( -72.34 by residue)
QMean score : 0.306
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