Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSQINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMND--ARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALG-VQDYFIGEPKGFYKVDPS--RAPLPRYLSALGMTGMTAYFALLDVGQPKNG--ETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNK-----------EAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV |
| 2ZB3 Chain:A ((38-347)) | -----------------------------------EGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERN-----ITRER---FTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186965 for 2464 contacts (-75.9/contact) +
2D Compatibility (PS) -31427 + (NN) -12293 + (LL) 2336
1D Compatibility (HY) -28400 + (ID) 6200
Total energy: -262949.0 ( -106.72 by residue)
QMean score : 0.502
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