Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLTGKRALIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLRGRVEEFASGWGSRPELCFPCDVADDSQIEAVFAALGKHWDGLDIIVHSVGFAPGDQLDGDFTAVTTREGFRIAHDISAYSFIALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNVMGMAKASLEAGVRYLAGSLGAEGTRVNAVSAGPIRTLAASGIKSFRKMLAANERQTPLRRNVTIEEVGNAGAFLCSDLASGISGEILYVDGGFNTTAMGPLDDD
4D46 Chain:A ((2-256))
-GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI------------------EAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN-----
General information:
TITO was launched using:
RESULT:
Template:
4D46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168111 for 1996 contacts (-84.2/contact) +
2D Compatibility (PS) -25860 + (NN) -11948 + (LL) 1252
1D Compatibility (HY) -28000 + (ID) 8250
Total energy: -240917.0 ( -120.70 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_4D46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D46-query.scw
PDB file :
Tito_Scwrl_4D46.pdb
: