Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLE--AYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVARQR
1MWW Chain:A ((1-114))
--MITVFGLKSKL-APRREKLAEVIYNSLHLGLDIPKGKHAIRFLCLEKEDFYYPFDR-SDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGI---RAHDVEITIKEQPAHCWGFRGMTGDE
General information:
TITO was launched using:
RESULT:
Template:
1MWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43148 for 784 contacts (-55.0/contact) +
2D Compatibility (PS) -12256 + (NN) -3251 + (LL) 196
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -64109.0 ( -81.77 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_1MWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWW-query.scw
PDB file :
Tito_Scwrl_1MWW.pdb
: