Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDP---QLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARA--------
1BCF Chain:A ((1-157))
--MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDL-ALELDGAKNLREAIGYADSVHDYVSRDMM-IEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREE
General information:
TITO was launched using:
RESULT:
Template:
1BCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9279 for 1071 contacts (-8.7/contact) +
2D Compatibility (PS) -16357 + (NN) -11699 + (LL) -184
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -41719.0 ( -38.95 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1BCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BCF-query.scw
PDB file :
Tito_Scwrl_1BCF.pdb
: