Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQALHEAHRHGAIQGVYLWGPVGRGKTWLMDHFYQCLRVPARRQHFHHFMQWVHQRQFELTGTADPLRALAREL---ARDVRVLCFDELFVSDIGDAILLGSLLRIMFEEGVVLVATSNQPPEQLYADGFNRERFLPAIEAIQRHMAVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGFAELFARLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDFIGLCDRYRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG |
2CHQ Chain:A ((37-141)) | -----------------------------------------------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVV---RHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-KSCRFILSCNY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72424 for 666 contacts (-108.7/contact) +
2D Compatibility (PS) -10733 + (NN) -2689 + (LL) 20144
1D Compatibility (HY) -400 + (ID) 800
Total energy: -66902.0 ( -100.45 by residue)
QMean score : 0.323
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