Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVV-SFVWGPGQITPVHDH-RVWGLIGMLRGAEYSQPYAFDAGGRPH-PSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFI-SGYSN--SRLPNIWDLSKENPA
2ATF Chain:A ((5-190))
--ELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYES--NPAEWALYA--KFDQYRYTRNLVDQGNG--KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIG-LHRVENVSHTEPAVSLHLYSPPFDTCHAFD-QRTGHKNKVTMTFHSKFGIRTP-----------
General information:
TITO was launched using:
RESULT:
Template:
2ATF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29367 for 1312 contacts (-22.4/contact) +
2D Compatibility (PS) -19473 + (NN) -13123 + (LL) 1468
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -70495.0 ( -53.73 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_2ATF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ATF-query.scw
PDB file :
Tito_Scwrl_2ATF.pdb
: