Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAILVIAEHNNAAL-AAATLNTVAAAKAIGGDIHVLVAGQNVAAVAEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAELGKN--YSHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSPDTFKRPIYAGNAIATVQSSAAVKVITVRTTGFDAVAAEGGSAAVEQVSGPADAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV- |
1EFV Chain:A ((2-313)) | QSTLVIAEHANDSLA-PITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228497 for 2654 contacts (-86.1/contact) +
2D Compatibility (PS) -33326 + (NN) -13764 + (LL) 144
1D Compatibility (HY) -32000 + (ID) 9600
Total energy: -317043.0 ( -119.46 by residue)
QMean score : 0.560
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