Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFALIGAAGYIAP-RHMRAIKDT--GNCLVSAYDINDSV-GIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRG---NWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVH-------FTSEYKAAGYLEYEQARV-RWFLSVDANDLP---ESVKGKKPTYR--SITVNGE--EMEFSEGFTDLHTTSYEEILAGRGY---GIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
1ZH8 Chain:A ((18-335)) | KIRLGIVGCG-IAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLE---------SGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDPVFMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLILGEIEWISAVAKDLSPLLGGMDFLSSIFEFENGTVGNYTISYSLKGNERFEITGTKGKISISWDKIVLNEEEMKVPQENSYQKEFEDFYQVVAEGKPNDLGSPVQALKDLAFIEACVRSAGNKVF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145097 for 2449 contacts (-59.2/contact) +
2D Compatibility (PS) -30519 + (NN) 462 + (LL) 856
1D Compatibility (HY) -10400 + (ID) 2550
Total energy: -187248.0 ( -76.46 by residue)
QMean score : 0.408
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