Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRSPLFSQFPLHERLLKALESLSFSEPTPVQAAAIPKAL--EGHDLRVTAQTGSGKTAAFLLPLLHRLL-AEDKPRSLARALILLPTRELAQQTLKEVERFAQFTF---IKACL-ITGGEDFKVQGARLRK-NPEIIIGTPGRLLEQ-RNAGNLPLQDIEVLVLDEADRMLDMGFADD------VLALANACPAER-QTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVG----ELNENVRQQVITADDVAHK-----EQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHK----VFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
| 3I62 Chain:A ((79-458)) | -----------LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDK-VQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPT-VKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELE---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147524 for 2890 contacts (-51.0/contact) +
2D Compatibility (PS) -39085 + (NN) -28571 + (LL) 4788
1D Compatibility (HY) -30400 + (ID) 6100
Total energy: -246892.0 ( -85.43 by residue)
QMean score : 0.497
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