Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSTPLTLIATITAAPGHAEALERELRALVAPSRAEAGCLQYDLHQDRHDSHLFYMIEQWRDDAALERHQNTEHFLRFSRGNEALL----QNVKIDQLYRLA
1Y0H Chain:A ((1-101))
GMTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESA-DGGELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEAS
General information:
TITO was launched using:
RESULT:
Template:
1Y0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25874 for 621 contacts (-41.7/contact) +
2D Compatibility (PS) -10626 + (NN) -3178 + (LL) 44
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -49084.0 ( -79.04 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1Y0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y0H-query.scw
PDB file :
Tito_Scwrl_1Y0H.pdb
: