Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQDKLKVAVLFGGSSEERDVSIASGAQVIQALRSAGHQ--VLAVDTASGLLGAEEERRLLASKVKEVPPDSDSLAIIRSGKQSLLSAGE----------LAGVDVFFLALHGGTGEDGTLQALLDAGGFAYTGSGHLASAMAMDKDVAKRLFLAAGVETASWLM------APASEEEVREQLGFPLVVKPNSQGSTVGLSIVHSQAELQPAIELAGRYGDEVMLERFVAGREVTVGVLDDQALP----VGEILLGGQEVFDYEHKYQAGAVRE-VFPADLPPAIAAEAQRLALKVHRALKLSGYSRTDFRLDEQGRLWCLEVNTLPGMTATSLLPQAAAAAGIGFAELCERICRLGIERCKGARKARS |
3R5F Chain:A ((20-379)) | ----KIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHAD------DPARIALHRSGRGVALLPGAQQQQLRPIQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVCFDRHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALAYDHKVLVEAAVAGREIECAVLGN-AVPHASVCGEVVV------------------EIVIPADIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCADGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRLIELALERHTDDQLLRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157341 for 2593 contacts (-60.7/contact) +
2D Compatibility (PS) -34711 + (NN) -14618 + (LL) 1524
1D Compatibility (HY) -32400 + (ID) 6050
Total energy: -243596.0 ( -93.94 by residue)
QMean score : 0.462
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