Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGL---AVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMK-TATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESCNLWQGAQVILSTALSSIEGRVLGVDSR-GALRLEVDGVEQGFSGGELSLRLRQ |
3EFR Chain:B ((8-231)) | ---------------------------------------------------------------------------LKEVDSTQ-ERLKEWNVSYGT--ALVADRQTKGRGGLGRKWLSQEG-GLYFSFLLN----PKEFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKD-----KLIVGIGINVNQREIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKL-LGEGKITGKLVGLSEKGGALILTEEGIKEILS-GEFSLR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82126 for 1738 contacts (-47.3/contact) +
2D Compatibility (PS) -23185 + (NN) -8242 + (LL) 5832
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -128471.0 ( -73.92 by residue)
QMean score : 0.408
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