Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFV--FAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGFRITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPLGTGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQVRLAQGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS |
4WIK Chain:A ((6-233)) | AAALSVRNLSPYVSNELLEEAFSQFG--------------------PIERAVVIVDDRGRST-------GKGIVEFASKPAARKAFERCSE--GVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETP---PRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11608 for 1138 contacts (-10.2/contact) +
2D Compatibility (PS) -24485 + (NN) -6641 + (LL) 60
1D Compatibility (HY) 400 + (ID) 1650
Total energy: -43924.0 ( -38.60 by residue)
QMean score : 0.326
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