Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGR----SEERLGPLLR----GQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR-------EGDCAMVTYNLNERA--ERPVIEYAAAHAKGILVKKALASGHACL--------------------GAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-QALKKA |
| 3N6Q Chain:A ((10-323)) | ---YGQMQY-RYCGKSGLRLPALSLGLWHNFGH----------VNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENT---PMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117409 for 2107 contacts (-55.7/contact) +
2D Compatibility (PS) -27239 + (NN) -11068 + (LL) 1000
1D Compatibility (HY) -9200 + (ID) 2850
Total energy: -166766.0 ( -79.15 by residue)
QMean score : 0.550
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