Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLER-LDRY--------------WPQPP---QQTWCSVGAATAAILEAYGLDVTYPE--QGDDSEALLALPAFQDSLRVHDPK----------VLI---MRGEGGREFLAERLRGQGVQVDYLPLYRRR-----------APDYPAGELLARVRAE--RLNGLVVSSGQGLQN------LYQLAAAD------------WPEIGRLPLFVP-SPRVAEMARELGAQRVIDCRGASAPALLAALTSAA-------------- |
| 1C3J Chain:A ((1-351)) | MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGL---NVDIISLKNGVYTKSFDEV--DVNDYDRLIVVNSNLAILSAQKFMAKYKSKIYYLFTDIRLPFSQSAYLYTEEELLIKSPIKVISQGINLDIAKAAHKKVDNVIEFEYFPIEQYKIHMNDFQLSKPTKKTLDVIYGGSFRSGQRESKMVEFLFDTGLNIEFFGNAREKQFKNPKYPWTKAPVFTGKIPMNMVSEKNSQAIAALIIGDKNYNDNFITLRVWETMASDAVMLIDEEFDTKHRIINDARFYVNNRAELIDRVNELKHSDVLRKEMLSIQHDILNKTRAKKAEWQDAFKKAIDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62063 for 1570 contacts (-39.5/contact) +
2D Compatibility (PS) -26334 + (NN) -7288 + (LL) 372
1D Compatibility (HY) -12800 + (ID) 2050
Total energy: -110163.0 ( -70.17 by residue)
QMean score : 0.226
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