Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINATLIGQSVAFFIFVLFCMKFVWPPVIAALQERQKKIADGLDAANRAARDLELAHEKAGQQLREAKAQAAEIVEQAKKRANQIVDEARDQARTEGERLKAQAQAEIEQELNSVKDALRAQVGALAVTGAEKILGASIDANAHEQLVSKLAAEI |
| 2K88 Chain:A ((1-60)) | ------------------------------------------------------MVSQKNGIATLLQAEKEAHEIVSKARKYRQDKLKQAKTDAAKEIDSYKIQKDKELKEFEC------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16820 for 231 contacts (72.8/contact) +
2D Compatibility (PS) -7047 + (NN) -3525 + (LL) 8948
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 12496.0 ( 54.10 by residue)
QMean score : 0.640
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