Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVGKLVFNQSEPTEFVFRAFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTHSTLRTPMYFFLSNLSFLELCYTTVVVPLMLSNILGAQKPISLAGCGAQMFFFVTLGSTD----CFLLAIMAYDRYVAICHPLHY-TLIMTRELCTQML--GGALGLALFPSLQLTALIFTLPFCGHHQEINHFLCDVPP---VLRLACADIRVHQAVLYVVSIL--VLTIPFLLICVSYVFITCAILSIRSAEGRRRA-----FSTCSFHLT---VVLLQYGC------CSLVYLRPRSSTSEDEDSQIALVYTFVTPLLNPLLYSLRNKDVKGALRSAIIRKAASDAN |
2Y23 Chain:A ((6-312)) | ---------TKEVVVNVDDDGVISLNFECDK-----------MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTF----------------KDLGMDDLG---IYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236784 for 1741 contacts (-136.0/contact) +
2D Compatibility (PS) -30294 + (NN) -900 + (LL) 4320
1D Compatibility (HY) -4000 + (ID) 2250
Total energy: -269908.0 ( -155.03 by residue)
QMean score : 0.107
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