Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MVLNVYCCFFQISDIQTMKINQTILKEFILVGFSVYPHVQTFLFVVFFCLYLLTLAGNLIIMGLTWVDRSLHTPMYLFLSALSFSE--------------TCYTLTIVPKMLEDLLAKDR----SISVTGCSLQMCFFLGLGGTNCIILTLMGYDRFLAICNPLRYPLLMTNIVCGQLVASACTAGFFISLTETALIF---RDSFCRPNLVKHFFCHMLAVIRLSCIDSNHTEFIITLISVSGLLGTLLLIILTDVFIISTV----LRIPSAEGKQKAFTTCASHLTVVI-----IHFGFASIVYLKPEASGDDTLIAVPYTVITPF--LSPIIFSLRNKDMKNAFRRMMGNTVALKK |
| 4KPP Chain:A ((2-396)) | DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRS-FSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRRFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFAKRKEIVESFRTVKRLI-SLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -348410 for 2693 contacts (-129.4/contact) +
2D Compatibility (PS) -32611 + (NN) -2267 + (LL) 460
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -392878.0 ( -145.89 by residue)
QMean score : 0.126
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