Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANVTLVTGFLLMGFSNIQKLRILYGVLFLLIYLAALMSNLLIITLITLDVKLQTPMYFFLKNLSFLDVFLVSVPIPKFIVNNLTHNNSISILGCAFQLLLMTSFSAGEIFILTAMSYDRYVAICCPLNYEVIMNTGVCVLMASVSWAIGGLFGTAYTAGTFSMPFCGSSVI-PQFFCDVPSLLRI-SCSETLMVIYAGIGVGACLSISCFICIVISYIYIFSTVLKIPTTKGQSKAFSTCFPHLTVFTVFIITAYFVYLKPPSNSPSVIDRLLSVIY---TVMPPVFNPVTYSLRNNDMKCA--LIRLLQKTYGQEAYFI |
| 4K92 Chain:A ((17-259)) | ----AVDEEDFIKAFDDVPVVQIYS-------------SRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLL------------AGAAEYDNFFQHLRL----LDGAFKLSAKD----------LRSQVVRE--ACITLGHLSSVLGNKFDHGAEA------------IMPTIFNLIPNSAKIMA-----------------TSGVVAVRLIIRHTHI-PRLIPVITSNCTSKSVAVRRRCFEFLDLLLQE--WQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277821 for 1886 contacts (-147.3/contact) +
2D Compatibility (PS) -23540 + (NN) 1698 + (LL) 5760
1D Compatibility (HY) -1200 + (ID) 1750
Total energy: -296853.0 ( -157.40 by residue)
QMean score : 0.252
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