Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MELWNFTLGSGFILVGI-LNDSGSPELLCATITILYLLALISNGLLLLAITMEARLHMPMYLLLGQLSLMDLLFTSVVTPKALADFLRRENTISFGGCALQMFLALTMGGAEDLLLAFMAYDRYVAICHPLTYMTLMSSRACWLMVATSWILASLSALIYTVYTMHYPFCRAQEIRHLLCEIPHLLKVAC--------ADTSRYELMVYVMGVTFLIPSLAAILASYTQILLTVLHMPS------NEGRKKALVTCSSHLTVVGMFYGAATFMYVLPSSFHS-----TRQDNIISVFYTIVTPALNPLIYSLRNKEVMRALRRVL---------GKYMLPAHSTL------- |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRY--------------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIP-LIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270429 for 2401 contacts (-112.6/contact) +
2D Compatibility (PS) -31201 + (NN) -3335 + (LL) 1524
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -307091.0 ( -127.90 by residue)
QMean score : 0.230
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