Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGN-GTILAVIKVEPSLHEPTYYFLSILALTDVSLSMST----------LPSMLSIYW--FNAPQIVFDACIMQ---MFFIHVFGIVESGVLVSMAFDRFVAIRNP----LHYVSILTHDVIRKTGIAVLTRAVCVVFPVPFLIKCLPFCHSNVLSHSYCLHQNMMRLACASTRINSLYGLIVVIFTLGLDVLLTLLSYV----LTLKTVLGIVSRGERLKTLSTCLSHMSTVLLFY----------VPFMG-AASMIHRFWEHLSPVVHMVMADIYLL-----LPPVLNPIVYSVKTKQI- |
| 5BTR Chain:A ((4-390)) | DNLLFGDEIITNGSDWTPRPRIGPYTFVQQHLMIGTDPRTILKDLLPETIPPPELDDMTLWQIVINILSEPPKRKKRKDINTIEDAVKLLQESK----KIIVLTGAGVSVSSGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRIIQC-HGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFDVELLGDCDVIINELCHRLGGEYAKLSSNPVKLSEITEQYLFLPPNRYIFHGAEVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269829 for 2266 contacts (-119.1/contact) +
2D Compatibility (PS) -30362 + (NN) 3523 + (LL) 684
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -306584.0 ( -135.30 by residue)
QMean score : 0.218
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