Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGLNGTPFQPATLQLTGIPGIQTGLTWVALIFCILYMISIVGNLSILTLVFWEPALHQPMYYFLSMLALNDLGVSFSTLPTVISTFCFNYNHVAFNACLVQMFFIHTFSFMESGILLAMSLDRFVAICYPLRYVTVLTHNRILAMGLGILTKSF--------TTLFPFPFVVKRLPFCKGNVLHHSYCLHPDLMKVACGDIHVNNIYGLLVIIFTYGMDSTFILLSYALILRAMLVIISQEQRLKALNTCMSHICAVLAFYVP--IIAVSMIHRFWKSAPPVVHVMMSNVYLFVPPMLNPIIYSVKTKEIRKGILKFFHKSQA--- |
4B9E Chain:A ((5-301)) | -----DPLLPGFDYLTLHTSA-------------ARLRVAVKGSGPPLLLLHGYPQTHLAWHRIAPRLA-EDYSVVLADLRGYGESRALDEEGADYSKAALARDQLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVAAFVSLTVVPILDNWAAVNKVFALNAYHWFLLAQPYDLPERLIGADPEHFLDYTLRRMAQGR--DIYHPQALESYRRAFRDPAVRHAMCEDYRAAVG-VDADADQADRDAGRRLQCPVQVLWQERPYAAGQHPLEIWKTWAGQVEGAAIGASHMLPEDA--------PDAVLEHLLGFLASHREALR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -371501 for 2513 contacts (-147.8/contact) +
2D Compatibility (PS) -30204 + (NN) -10668 + (LL) 2924
1D Compatibility (HY) 4800 + (ID) 1300
Total energy: -405949.0 ( -161.54 by residue)
QMean score : 0.274
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